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OPTN optineurin [ Falco cherrug (Saker falcon) ]

Gene ID: 102058602, updated on 3-Aug-2024

Summary

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Gene symbol
OPTN
Gene description
optineurin
See related
EnsemblRapid:ENSFCHG00000001602
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 5 NC_073701.1 (68875633..68895659)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994725.1 (1693106..1712373, complement)

Chromosome 5 - NC_073701.1Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin dependent protein kinase ID Neighboring gene coiled-coil domain containing 3 Neighboring gene minichromosome maintenance 10 replication initiation factor Neighboring gene phytanoyl-CoA 2-hydroxylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi ribbon formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
optineurin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073701.1 Reference bFalChe1.pri Primary Assembly

    Range
    68875633..68895659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055712073.1 → XP_055568048.1  optineurin isoform X1

  2. XM_055712072.1 → XP_055568047.1  optineurin isoform X2

  3. XM_055712070.1 → XP_055568045.1  optineurin isoform X1

  4. XM_055712074.1 → XP_055568049.1  optineurin isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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