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VPS45 vacuolar protein sorting 45 homolog [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102045329, updated on 3-Aug-2024

Summary

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Gene symbol
VPS45
Gene description
vacuolar protein sorting 45 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See VPS45 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054618.1 (119835..134407)

NW_005054618.1Genomic Context describing neighboring genes Neighboring gene synaptic vesicle glycoprotein 2A Neighboring gene OTU deubiquitinase 7B Neighboring gene pleckstrin homology domain containing O1 Neighboring gene acidic nuclear phosphoprotein 32 family member E

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054618 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054618.1 Reference GeoFor_1.0

    Range
    119835..134407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031064703.1 → XP_030920563.1  LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 45

    UniProtKB/TrEMBL
    A0A8N5F045
    Conserved Domains (1) summary
    pfam00995
    Location:10 → 521
    Sec1; Sec1 family
Nucleotide Protein
Heading Accession and Version

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