U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CREBBP CREB binding protein [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102043483, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
CREBBP
Gene description
CREB binding protein
See related
Ensembl:ENSGFOG00000011800
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054383.1 (2414923..2498993)

NW_005054383.1Genomic Context describing neighboring genes Neighboring gene sarcalumenin Neighboring gene adenylate cyclase 9 Neighboring gene TNF receptor associated protein 1 Neighboring gene SLX4 structure-specific endonuclease subunit

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005054383 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: CREB-binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054383.1 Reference GeoFor_1.0

    Range
    2414923..2498993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014308739.2 → XP_014164214.1  LOW QUALITY PROTEIN: CREB-binding protein

    UniProtKB/TrEMBL
    A0A6I9Z796
    Related
    ENSGFOP00000017417.1, ENSGFOT00000017984.1
    Conserved Domains (11) summary
    cd05495
    Location:1071 → 1178
    Bromo_cbp_like; Bromodomain, cbp_like subfamily. Cbp (CREB binding protein or CREBBP) is an acetyltransferase acting on histone, which gives a specific tag for transcriptional activation and also acetylates non-histone proteins. CREBBP binds specifically to ...
    TIGR01628
    Location:638 → 809
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    smart00551
    Location:1750 → 1828
    ZnF_TAZ; TAZ zinc finger, present in p300 and CBP
    cd02337
    Location:1689 → 1729
    ZZ_CBP; Zinc finger, ZZ type. Zinc finger present in CBP/p300 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. CREB-binding protein (CBP) is a large multidomain protein that ...
    cd15802
    Location:1190 → 1262
    RING_CBP-p300; atypical RING domain found in CREB-binding protein and p300 histone acetyltransferases
    cd15557
    Location:1264 → 1295
    PHD_CBP_p300; PHD finger found in CREB-binding protein (CBP) and histone acetyltransferase p300
    pfam09606
    Location:674 → 979
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam02135
    Location:335 → 402
    zf-TAZ; TAZ zinc finger
    pfam02172
    Location:558 → 638
    KIX; KIX domain
    pfam08214
    Location:1326 → 1537
    HAT_KAT11; Histone acetylation protein
    pfam09030
    Location:1925 → 1995
    Creb_binding; Creb binding
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.