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RIMS4 regulating synaptic membrane exocytosis 4 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102042848, updated on 3-Aug-2024

Summary

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Gene symbol
RIMS4
Gene description
regulating synaptic membrane exocytosis 4
See related
Ensembl:ENSGFOG00000002059
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054337.1 (4091687..4146420, complement)

NW_005054337.1Genomic Context describing neighboring genes Neighboring gene P2Y purinoceptor 1-like Neighboring gene potassium channel subfamily K member 9-like Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta Neighboring gene poly(A) binding protein cytoplasmic 1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054337 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton of presynaptic active zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulating synaptic membrane exocytosis protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054337.1 Reference GeoFor_1.0

    Range
    4091687..4146420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031057948.1 → XP_030913808.1  regulating synaptic membrane exocytosis protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8N5HY60
    Related
    ENSGFOP00000002971.1, ENSGFOT00000003041.1
    Conserved Domains (1) summary
    cd04028
    Location:47 → 192
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins

  2. XM_031057949.1 → XP_030913809.1  regulating synaptic membrane exocytosis protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8N5HYQ3
    Conserved Domains (1) summary
    cl14603
    Location:47 → 144
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

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