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F7 coagulation factor VII [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102035674, updated on 3-Aug-2024

Summary

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Gene symbol
F7
Gene description
coagulation factor VII
See related
Ensembl:ENSGFOG00000004252
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054315.1 (3558010..3566407)

NW_005054315.1Genomic Context describing neighboring genes Neighboring gene ATPase phospholipid transporting 11A Neighboring gene MCF.2 cell line derived transforming sequence like Neighboring gene coagulation factor X-like Neighboring gene coagulation factor X

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054315 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in blood coagulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coagulation factor VII

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054315.1 Reference GeoFor_1.0

    Range
    3558010..3566407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005419968.1 → XP_005420025.1  coagulation factor VII

    UniProtKB/TrEMBL
    A0A6I9HFP0
    Related
    ENSGFOP00000006012.1, ENSGFOT00000006188.1
    Conserved Domains (4) summary
    smart00069
    Location:22 → 84
    GLA; Domain containing Gla (gamma-carboxyglutamate) residues
    cd00054
    Location:86 → 122
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00190
    Location:192 → 423
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam14670
    Location:131 → 167
    FXa_inhibition; Coagulation Factor Xa inhibitory site
Nucleotide Protein
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