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Bbs7 Bardet-Biedl syndrome 7 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102017686, updated on 10-Mar-2024

Summary

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Gene symbol
Bbs7
Gene description
Bardet-Biedl syndrome 7
See related
Ensembl:ENSCLAG00000004340
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955428.1 (18682072..18724560)

NW_004955428.1Genomic Context describing neighboring genes Neighboring gene bridge-like lipid transfer protein family member 1 Neighboring gene transient receptor potential cation channel subfamily C member 3 Neighboring gene exosome component 9 Neighboring gene cyclin A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955428.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BBSome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bardet-Biedl syndrome 7 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955428.1 Reference ChiLan1.0 Primary Assembly

    Range
    18682072..18724560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005386781.1 → XP_005386838.1  Bardet-Biedl syndrome 7 protein isoform X1

    See identical proteins and their annotated locations for XP_005386838.1

    UniProtKB/TrEMBL
    A0A8C2UUV2
    Related
    ENSCLAP00000006128.1, ENSCLAT00000006231.1
    Conserved Domains (1) summary
    cl24051
    Location:172 → 268
    BBS2_Mid; Ciliary BBSome complex subunit 2, middle region

  2. XM_005386780.2 → XP_005386837.1  Bardet-Biedl syndrome 7 protein isoform X1

    See identical proteins and their annotated locations for XP_005386837.1

    UniProtKB/TrEMBL
    A0A8C2UUV2
    Conserved Domains (1) summary
    cl24051
    Location:172 → 268
    BBS2_Mid; Ciliary BBSome complex subunit 2, middle region

  3. XM_013515310.1 → XP_013370764.1  Bardet-Biedl syndrome 7 protein isoform X2

    Conserved Domains (1) summary
    cl24051
    Location:82 → 147
    BBS2_Mid; Ciliary BBSome complex subunit 2, middle region

  4. XM_013515309.1 → XP_013370763.1  Bardet-Biedl syndrome 7 protein isoform X1

    UniProtKB/TrEMBL
    A0A8C2UUV2
    Conserved Domains (1) summary
    cl24051
    Location:172 → 268
    BBS2_Mid; Ciliary BBSome complex subunit 2, middle region
Nucleotide Protein
Heading Accession and Version

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