U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rnf135 ring finger protein 135 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102011661, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Rnf135
Gene description
ring finger protein 135
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955481.1 (7111760..7122800)

NW_004955481.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102023358 Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene ras homolog family member T1 Neighboring gene uncharacterized LOC106146474 Neighboring gene uncharacterized LOC106146473

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004955481.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoprotein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase RNF135

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955481.1 Reference ChiLan1.0 Primary Assembly

    Range
    7111760..7122800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005402930.2 → XP_005402987.2  E3 ubiquitin-protein ligase RNF135 isoform X1

    Conserved Domains (2) summary
    cd00162
    Location:18 → 60
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cd12902
    Location:229 → 396
    SPRY_PRY_RNF135; PRY/SPRY domain in RING finger protein RNF135

  2. XM_013503524.1 → XP_013358978.1  E3 ubiquitin-protein ligase RNF135 isoform X2

    Conserved Domains (2) summary
    cd00162
    Location:18 → 60
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cd12902
    Location:228 → 395
    SPRY_PRY_RNF135; PRY/SPRY domain in RING finger protein RNF135

  3. XM_013503526.1 → XP_013358980.1  E3 ubiquitin-protein ligase RNF135 isoform X3

    Conserved Domains (2) summary
    cd00162
    Location:18 → 60
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cd12902
    Location:223 → 390
    SPRY_PRY_RNF135; PRY/SPRY domain in RING finger protein RNF135
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.