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Cln8 CLN8 transmembrane ER and ERGIC protein [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101985568, updated on 8-Mar-2024

Summary

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Gene symbol
Cln8
Gene description
CLN8 transmembrane ER and ERGIC protein
See related
Ensembl:ENSMOCG00000018067
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) Unplaced Scaffold NW_004949105.1 (3577403..3586685, complement)

NW_004949105.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 10 Neighboring gene uncharacterized LOC113458194 Neighboring gene DLG associated protein 2 Neighboring gene glutamate rich 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004949105 Unplaced Scaffold Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CLN8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NW_004949105.1 Reference MicOch1.0

    Range
    3577403..3586685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005366236.3 → XP_005366293.1  protein CLN8

    See identical proteins and their annotated locations for XP_005366293.1

    Conserved Domains (1) summary
    smart00724
    Location:64 → 262
    TLC; TRAM, LAG1 and CLN8 homology domains

  2. XM_005366235.3 → XP_005366292.1  protein CLN8

    See identical proteins and their annotated locations for XP_005366292.1

    Related
    ENSMOCP00000020364.1, ENSMOCT00000024186.1
    Conserved Domains (1) summary
    smart00724
    Location:64 → 262
    TLC; TRAM, LAG1 and CLN8 homology domains

  3. XM_026788818.1 → XP_026644619.1  protein CLN8

    Conserved Domains (1) summary
    smart00724
    Location:64 → 262
    TLC; TRAM, LAG1 and CLN8 homology domains
Nucleotide Protein
Heading Accession and Version

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