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Catsper1 cation channel sperm associated 1 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101978905, updated on 8-Mar-2024

Summary

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Gene symbol
Catsper1
Gene description
cation channel sperm associated 1
See related
Ensembl:ENSMOCG00000002535
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 8 NC_022015.1 (40106795..40114789)

Chromosome 8 - NC_022015.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3b subunit 2 Neighboring gene galactose-3-O-sulfotransferase 3 Neighboring gene cystatin E/M Neighboring gene barrier to autointegration nuclear assembly factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022015.1 Chromosome 8 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in flagellated sperm motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cilium beat frequency involved in ciliary motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CatSper complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cation channel sperm-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022015.1 Reference MicOch1.0

    Range
    40106795..40114789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013347786.1 → XP_013203240.1  cation channel sperm-associated protein 1

    Related
    ENSMOCP00000003183.1, ENSMOCT00000003405.1
    Conserved Domains (2) summary
    pfam00520
    Location:336 → 531
    Ion_trans; Ion transport protein
    cl05127
    Location:3 → 78
    DUF4779; Domain of unknown function (DUF4779)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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