U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101973161 ER degradation-enhancing alpha-mannosidase-like protein 2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101973161, updated on 16-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101973161
Gene description
ER degradation-enhancing alpha-mannosidase-like protein 2
Locus tag
H1C71_018141
See related
EnsemblRapid:ENSSTOG00015015804
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Also known as
Edem2
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101973161 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024408640.1 (173144037..173171273, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936561.1 (5578267..5605512)

NW_024408640.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily C member 4 associated protein Neighboring gene ELMO domain-containing protein 3-like Neighboring gene U6 spliceosomal RNA Neighboring gene protein C receptor Neighboring gene matrix metallopeptidase 24 Neighboring gene MMP24 opposite strand

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum mannose trimming IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ER degradation-enhancing alpha-mannosidase-like protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024408640.1 Reference HiC_Itri_2 Primary Assembly

    Range
    173144037..173171273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005329896.3 → XP_005329953.1  ER degradation-enhancing alpha-mannosidase-like protein 2

    UniProtKB/TrEMBL
    I3MI73
    Related
    ENSSTOP00015019332.1, ENSSTOT00015021191.1
    Conserved Domains (1) summary
    pfam01532
    Location:42 → 480
    Glyco_hydro_47; Glycosyl hydrolase family 47
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.