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Brat1 BRCA1 associated ATM activator 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101966867, updated on 8-Mar-2024

Summary

Gene symbol
Brat1
Gene description
BRCA1 associated ATM activator 1
Locus tag
H1C71_029819
See related
EnsemblRapid:ENSSTOG00015020104
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024409344.1 (142647090..142658339, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936823.1 (393878..404348)

NW_024409344.1Genomic Context describing neighboring genes Neighboring gene G protein subunit alpha 12 Neighboring gene archaelysin family metallopeptidase 1 Neighboring gene IQ motif containing E Neighboring gene tweety family member 3

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cell population proliferation IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
BRCA1-associated ATM activator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024409344.1 Reference HiC_Itri_2 Primary Assembly

    Range
    142647090..142658339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005340834.4XP_005340891.1  BRCA1-associated ATM activator 1

    UniProtKB/TrEMBL
    I3NDI9
    Related
    ENSSTOP00015024736.1, ENSSTOT00015026926.1
    Conserved Domains (1) summary
    sd00044
    Location:450489
    HEAT; HEAT repeat [structural motif]
  2. XM_040277188.1XP_040133122.1  BRCA1-associated ATM activator 1

    UniProtKB/TrEMBL
    I3NDI9
    Conserved Domains (1) summary
    sd00044
    Location:450489
    HEAT; HEAT repeat [structural motif]