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Lmnb2 lamin B2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101962121, updated on 8-Mar-2024

Summary

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Gene symbol
Lmnb2
Gene description
lamin B2
Locus tag
H1C71_007728
See related
EnsemblRapid:ENSSTOG00015022828
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405118.1 (216369489..216386878)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936588.1 (1448195..1465332, complement)

NW_024405118.1Genomic Context describing neighboring genes Neighboring gene growth arrest and DNA damage inducible beta Neighboring gene uncharacterized LOC120891553 Neighboring gene uncharacterized LOC120891552 Neighboring gene translocase of inner mitochondrial membrane 13 Neighboring gene transmembrane serine protease 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
lamin-B2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405118.1 Reference HiC_Itri_2 Primary Assembly

    Range
    216369489..216386878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005332002.4 → XP_005332059.1  lamin-B2 isoform X1

    UniProtKB/TrEMBL
    I3NG64
    Related
    ENSSTOP00015028271.1, ENSSTOT00015030706.1
    Conserved Domains (2) summary
    pfam00038
    Location:45 → 401
    Filament; Intermediate filament protein
    pfam00932
    Location:471 → 578
    LTD; Lamin Tail Domain

  2. XM_040290698.1 → XP_040146632.1  lamin-B2 isoform X3

    Conserved Domains (2) summary
    PHA03269
    Location:390 → 504
    PHA03269; envelope glycoprotein C; Provisional
    PRK10263
    Location:56 → 289
    PRK10263; DNA translocase FtsK; Provisional

  3. XM_040290697.1 → XP_040146631.1  lamin-B2 isoform X2

    Conserved Domains (2) summary
    PHA03269
    Location:390 → 504
    PHA03269; envelope glycoprotein C; Provisional
    PRK10263
    Location:56 → 289
    PRK10263; DNA translocase FtsK; Provisional

  4. XM_021730857.2 → XP_021586532.1  lamin-B2 isoform X4

    Conserved Domains (4) summary
    PHA03269
    Location:400 → 514
    PHA03269; envelope glycoprotein C; Provisional
    PRK10263
    Location:56 → 299
    PRK10263; DNA translocase FtsK; Provisional
    pfam00038
    Location:578 → 738
    Filament; Intermediate filament protein
    pfam00932
    Location:808 → 915
    LTD; Lamin Tail Domain
Nucleotide Protein
Heading Accession and Version

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