U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Xrcc2 X-ray repair cross complementing 2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101959714, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Xrcc2
Gene description
X-ray repair cross complementing 2
Locus tag
H1C71_003754
See related
EnsemblRapid:ENSSTOG00015008308
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405118.1 (5118065..5142946)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936527.1 (7760609..7785360, complement)

NW_024405118.1Genomic Context describing neighboring genes Neighboring gene actin related protein 3B Neighboring gene uncharacterized LOC120891783 Neighboring gene uncharacterized LOC110598273 Neighboring gene transfer RNA alanine (anticodon CGC)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA strand invasion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in replication fork IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA repair protein XRCC2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405118.1 Reference HiC_Itri_2 Primary Assembly

    Range
    5118065..5142946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005326690.4 → XP_005326747.1  DNA repair protein XRCC2

    UniProtKB/TrEMBL
    I3M0G6
    Related
    ENSSTOP00015010245.1, ENSSTOT00015011255.1
    Conserved Domains (1) summary
    cd19490
    Location:40 → 241
    XRCC2; XRCC2 recombinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.