U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Usp12 ubiquitin specific peptidase 12 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101957569, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Usp12
Gene description
ubiquitin specific peptidase 12
Locus tag
H1C71_014789
See related
EnsemblRapid:ENSSTOG00015007727
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Usp12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404945.1 (173484469..173561737)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936472.1 (22390418..22467690, complement)

NW_024404945.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD102 Neighboring gene ribosomal protein L21 Neighboring gene uncharacterized LOC120888692 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC120888693 Neighboring gene olfactory receptor 10T2-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ubiquitin carboxyl-terminal hydrolase 12

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404945.1 Reference HiC_Itri_2 Primary Assembly

    Range
    173484469..173561737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005317050.3 → XP_005317107.1  ubiquitin carboxyl-terminal hydrolase 12 isoform X1

    See identical proteins and their annotated locations for XP_005317107.1

    UniProtKB/TrEMBL
    I3MH73
    Related
    ENSSTOP00015009467.1, ENSSTOT00015010416.1
    Conserved Domains (1) summary
    cd02663
    Location:40 → 367
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  2. XM_040281648.1 → XP_040137582.1  ubiquitin carboxyl-terminal hydrolase 12 isoform X2

    Conserved Domains (1) summary
    cd02663
    Location:17 → 340
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.