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Alpl alkaline phosphatase, biomineralization associated [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101957190, updated on 8-Mar-2024

Summary

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Gene symbol
Alpl
Gene description
alkaline phosphatase, biomineralization associated
Locus tag
H1C71_032957
See related
EnsemblRapid:ENSSTOG00015013368
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405058.1 (41362174..41405120)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936474.1 (7209196..7229899)

NW_024405058.1Genomic Context describing neighboring genes Neighboring gene zinc finger CW-type PWWP domain protein 1-like Neighboring gene endothelin converting enzyme 1 Neighboring gene RAP1 GTPase activating protein Neighboring gene ubiquitin specific peptidase 48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alkaline phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline phosphatase, tissue-nonspecific isozyme
Names
alkaline phosphatase, liver/bone/kidney

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405058.1 Reference HiC_Itri_2 Primary Assembly

    Range
    41362174..41405120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040288070.1 → XP_040144004.1  alkaline phosphatase, tissue-nonspecific isozyme

    UniProtKB/TrEMBL
    I3NDP7
    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase

  2. XM_040288069.1 → XP_040144003.1  alkaline phosphatase, tissue-nonspecific isozyme

    UniProtKB/TrEMBL
    I3NDP7
    Related
    ENSSTOP00015016329.1, ENSSTOT00015017932.1
    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase

  3. XM_040288071.1 → XP_040144005.1  alkaline phosphatase, tissue-nonspecific isozyme

    UniProtKB/TrEMBL
    I3NDP7
    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase

  4. XM_005317554.3 → XP_005317611.1  alkaline phosphatase, tissue-nonspecific isozyme

    UniProtKB/TrEMBL
    I3NDP7
    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase
Nucleotide Protein
Heading Accession and Version

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