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XBP1 X-box binding protein 1 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101954056, updated on 1-Aug-2024

Summary

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Gene symbol
XBP1
Gene description
X-box binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 15 NC_088805.1 (34116128..34121117, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281560.1 (990230..995196, complement)

Chromosome 15 - NC_088805.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2, facilitated glucose transporter member 11-like Neighboring gene coiled-coil domain containing 117 Neighboring gene uncharacterized LOC122173935 Neighboring gene transfer RNA alanine (anticodon UGC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
X-box-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088805.1 Reference ASM1138683v2

    Range
    34116128..34121117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065568951.1 → XP_065425023.1  X-box-binding protein 1 isoform X2

  2. XM_065568952.1 → XP_065425024.1  X-box-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0AAJ6SQW1

  3. XM_065568950.1 → XP_065425022.1  X-box-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C3IVN9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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