U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BRCA1 BRCA1 DNA repair associated [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101942702, updated on 1-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
BRCA1
Gene description
BRCA1 DNA repair associated
See related
Ensembl:ENSCPBG00000016269
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 24
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 24 NC_088814.1 (591586..640030)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281579.1 (391780..439884)

Chromosome 24 - NC_088814.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 200 Neighboring gene transmembrane protein 106A Neighboring gene NBR1 autophagy cargo receptor Neighboring gene Rho family GTPase 2 Neighboring gene uncharacterized LOC135977352

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chordate embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dosage compensation by inactivation of X chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BRCA1-A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of BRCA1-BARD1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
breast cancer type 1 susceptibility protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088814.1 Reference ASM1138683v2

    Range
    591586..640030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042844013.2 → XP_042699947.2  breast cancer type 1 susceptibility protein isoform X1

    UniProtKB/TrEMBL
    A0AAJ7Y2D1

  2. XM_024111367.3 → XP_023967135.2  breast cancer type 1 susceptibility protein isoform X1

    UniProtKB/TrEMBL
    A0AAJ7Y2D1

  3. XM_024111371.3 → XP_023967139.2  breast cancer type 1 susceptibility protein isoform X2

    UniProtKB/TrEMBL
    A0A8C3HUC5

  4. XM_024111368.3 → XP_023967136.2  breast cancer type 1 susceptibility protein isoform X1

    UniProtKB/TrEMBL
    A0AAJ7Y2D1

  5. XM_065577579.1 → XP_065433651.1  breast cancer type 1 susceptibility protein isoform X3

    UniProtKB/TrEMBL
    A0AAJ7Y2D1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.