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SMARCD2 SWI/SNF related BAF chromatin remodeling complex subunit D2 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101940353, updated on 20-Sep-2024

Summary

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Gene symbol
SMARCD2
Gene description
SWI/SNF related BAF chromatin remodeling complex subunit D2
See related
Ensembl:ENSCPBG00000010665
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 24
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 24 NC_088814.1 (12417612..12452787, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281910.1 (35096..68525, complement)

Chromosome 24 - NC_088814.1Genomic Context describing neighboring genes Neighboring gene FtsJ RNA 2'-O-methyltransferase 3 Neighboring gene proteasome 26S subunit, ATPase 5 Neighboring gene alpha-2-macroglobulin-like protein 1 Neighboring gene uncharacterized LOC135977301 Neighboring gene alpha-2-macroglobulin-like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
Names
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088814.1 Reference ASM1138683v2

    Range
    12417612..12452787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065577607.1 → XP_065433679.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X2

    UniProtKB/TrEMBL
    A0AAJ6WGI7

  2. XM_005313371.4 → XP_005313428.4  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1

    UniProtKB/TrEMBL
    A0AAJ6WGI7
Nucleotide Protein
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Gene LinkOut

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