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CTHRC1 collagen triple helix repeat containing 1 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101931907, updated on 6-Jun-2024

Summary

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Gene symbol
CTHRC1
Gene description
collagen triple helix repeat containing 1
See related
Ensembl:ENSCPBG00000026056
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 2 NC_088792.1 (254985363..254999197)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281454.1 (2064533..2078275, complement)

Chromosome 2 - NC_088792.1Genomic Context describing neighboring genes Neighboring gene BAALC binder of MAP3K1 and KLF4 Neighboring gene uncharacterized LOC135981781 Neighboring gene frizzled class receptor 6 Neighboring gene solute carrier family 25 member 32 Neighboring gene DDB1 and CUL4 associated factor 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen triple helix repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088792.1 Reference ASM1138683v2

    Range
    254985363..254999197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005306046.4 → XP_005306103.1  collagen triple helix repeat-containing protein 1

    UniProtKB/TrEMBL
    A0A8C3IT38
    Related
    ENSCPBP00000037626.1
    Conserved Domains (1) summary
    pfam01391
    Location:53 → 85
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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