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NEUROD1 neuronal differentiation 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101925532, updated on 12-Jun-2024

Summary

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Gene symbol
NEUROD1
Gene description
neuronal differentiation 1
See related
Ensembl:ENSMFAG00000034877
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 12 NC_088386.1 (77223423..77227473, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 12 NC_052266.1 (66491205..66495608, complement)

Chromosome 12 - NC_088386.1Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha 4 Neighboring gene ceramide kinase like Neighboring gene uncharacterized LOC135966565 Neighboring gene uncharacterized LOC123567920 Neighboring gene histone deacetylase complex subunit SAP18-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables E-box binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurogenic differentiation factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088386.1 Reference T2T-MFA8v1.0

    Range
    77223423..77227473 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045367341.2 → XP_045223276.1  neurogenic differentiation factor 1

    UniProtKB/TrEMBL
    A0A2K5UBF3, A0A8J8Y5L5, G7PKY7
    Conserved Domains (2) summary
    cd19719
    Location:75 → 160
    bHLH_TS_NeuroD1; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 1 (NeuroD1) and similar proteins
    pfam12533
    Location:160 → 284
    Neuro_bHLH; Neuronal helix-loop-helix transcription factor

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001284616.1: Suppressed sequence

    Description
    NM_001284616.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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