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LUM lumican [ Falco peregrinus (peregrine falcon) ]

Gene ID: 101923786, updated on 3-Aug-2024

Summary

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Gene symbol
LUM
Gene description
lumican
See related
EnsemblRapid:ENSFPEG00020008773
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco peregrinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalPer1.pri (GCF_023634155.1) 6 NC_073726.1 (49986648..49998016)
102 previous assembly F_peregrinus_v1.0 (GCF_000337955.1) Unplaced Scaffold NW_004930355.1 (4803544..4814975, complement)

Chromosome 6 - NC_073726.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129784740 Neighboring gene decorin Neighboring gene keratocan Neighboring gene epiphycan

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lumican

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634155.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalPer1.pri Primary Assembly

Genomic

  1. NC_073726.1 Reference bFalPer1.pri Primary Assembly

    Range
    49986648..49998016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005242658.3 → XP_005242715.1  lumican

    See identical proteins and their annotated locations for XP_005242715.1

    Related
    ENSFPEP00020012753.1, ENSFPET00020013167.1
    Conserved Domains (3) summary
    PRK15370
    Location:45 → 246
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    PLN03210
    Location:201 → 297
    PLN03210; Resistant to P. syringae 6; Provisional
    sd00033
    Location:71 → 94
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
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