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CGB_D5400W WD-repeat protein, putative [ Cryptococcus gattii WM276 ]

Gene ID: 10191337, updated on 6-Jun-2024

Summary

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Gene symbol
CGB_D5400W
Gene description
WD-repeat protein, putative
Locus tag
CGB_D5400W
See related
FungiDB:CGB_D5400W; VEuPathDB:CGB_D5400W
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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Location:
chromosome: D
Exon count:
12
Sequence:
Chromosome: D; NC_014941.1 (1219413..1222659)

Chromosome D - NC_014941.1Genomic Context describing neighboring genes Neighboring gene Host-pathogen interaction-related protein, putative Neighboring gene Nitrogen metabolism-related protein, putative Neighboring gene mRNA processing-related protein, putative Neighboring gene Splicing factor SF1, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014941.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Pwp2p-containing subcomplex of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD-repeat protein, putative
XP_003193641.1
  • Similar to TIGR gene model, INSD accession AAW42904.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014941.1 Reference assembly

    Range
    1219413..1222659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003193593.1 → XP_003193641.1  WD-repeat protein, putative [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003193641.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E6R455
    Conserved Domains (4) summary
    COG2319
    Location:171 → 613
    WD40; WD40 repeat [General function prediction only]
    pfam04192
    Location:677 → 897
    Utp21; Utp21 specific WD40 associated putative domain
    sd00039
    Location:174 → 210
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:249 → 640
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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