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CGB_E1170C Delta adaptin-like subunit of the clathrin associated protein complex (AP-3), putative; Apl5p [ Cryptococcus gattii WM276 ]

Gene ID: 10190116, updated on 6-Jun-2024

Summary

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Gene symbol
CGB_E1170C
Gene description
Delta adaptin-like subunit of the clathrin associated protein complex (AP-3), putative; Apl5p
Primary source
FungiDB:CGB_E1170C
Locus tag
CGB_E1170C
See related
VEuPathDB:CGB_E1170C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_E1170C in Genome Data Viewer
Location:
chromosome: E
Exon count:
9
Sequence:
Chromosome: E; NC_014942.1 (232055..235283, complement)

Chromosome E - NC_014942.1Genomic Context describing neighboring genes Neighboring gene phosphoric monoester hydrolase, putative Neighboring gene cytoplasm protein, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014942.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Delta adaptin-like subunit of the clathrin associated protein complex (AP-3), putative; Apl5p
XP_003194175.1
  • Similar to TIGR gene model, INSD accession AAW43518.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014942.1 Reference assembly

    Range
    232055..235283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003194127.1 → XP_003194175.1  Delta adaptin-like subunit of the clathrin associated protein complex (AP-3), putative; Apl5p [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003194175.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E6R6J2
    Conserved Domains (1) summary
    pfam01602
    Location:24 → 525
    Adaptin_N; Adaptin N terminal region
Nucleotide Protein
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