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CGB_A0160C proline-tRNA ligase, putative [ Cryptococcus gattii WM276 ]

Gene ID: 10188341, updated on 17-May-2024

Summary

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Gene symbol
CGB_A0160C
Gene description
proline-tRNA ligase, putative
Primary source
FungiDB:CGB_A0160C
Locus tag
CGB_A0160C
See related
VEuPathDB:CGB_A0160C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_A0160C in Genome Data Viewer
Location:
chromosome: A
Exon count:
7
Sequence:
Chromosome: A; NC_014938.1 (43604..46208, complement)

Chromosome A - NC_014938.1Genomic Context describing neighboring genes Neighboring gene Hypothetical Protein Neighboring gene dolichol kinase, putative Neighboring gene Hypothetical protein Neighboring gene 3-hydroxyanthranilate 3,4-dioxygenase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014938.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proline-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prolyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline-tRNA ligase, putative
XP_003191154.1
  • Similar to TIGR gene model, INSD accession AAW42000.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014938.1 Reference assembly

    Range
    43604..46208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003191106.1 → XP_003191154.1  proline-tRNA ligase, putative [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003191154.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D0WAM6, E6QYW8
    Conserved Domains (4) summary
    PRK08661
    Location:235 → 740
    PRK08661; prolyl-tRNA synthetase; Provisional
    cd00778
    Location:245 → 508
    ProRS_core_arch_euk; Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of ...
    cd00862
    Location:514 → 740
    ProRS_anticodon_zinc; ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in ...
    cl00022
    Location:28 → 187
    YbaK_like; YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, ProX, and PrdX. The primary function of INS is to hydrolyze ...
Nucleotide Protein
Heading Accession and Version

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