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C2cd5 C2 calcium dependent domain containing 5 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101833593, updated on 8-Mar-2024

Summary

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Gene symbol
C2cd5
Gene description
C2 calcium dependent domain containing 5
See related
EnsemblRapid:ENSMAUG00000012466
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429187.1 (11317355..11412483, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801640.1 (10311792..10405624, complement)

NW_024429187.1Genomic Context describing neighboring genes Neighboring gene sulfotransferase 6B1 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 Neighboring gene uncharacterized LOC121139742 Neighboring gene ethanolamine kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of glucose transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C2 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429187.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    11317355..11412483 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040743570.1 → XP_040599504.1  C2 domain-containing protein 5 isoform X23

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  2. XM_040743568.1 → XP_040599502.1  C2 domain-containing protein 5 isoform X21

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  3. XM_040743569.1 → XP_040599503.1  C2 domain-containing protein 5 isoform X22

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  4. XM_040743564.1 → XP_040599498.1  C2 domain-containing protein 5 isoform X19

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  5. XM_040743562.1 → XP_040599496.1  C2 domain-containing protein 5 isoform X17

    Related
    ENSMAUP00000012191.2, ENSMAUT00000016095.2
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  6. XM_040743557.1 → XP_040599491.1  C2 domain-containing protein 5 isoform X12

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  7. XM_040743553.1 → XP_040599487.1  C2 domain-containing protein 5 isoform X9

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  8. XM_040743551.1 → XP_040599485.1  C2 domain-containing protein 5 isoform X7

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  9. XM_040743548.1 → XP_040599482.1  C2 domain-containing protein 5 isoform X4

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  10. XM_040743546.1 → XP_040599480.1  C2 domain-containing protein 5 isoform X2

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  11. XM_040743547.1 → XP_040599481.1  C2 domain-containing protein 5 isoform X3

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  12. XM_040743550.1 → XP_040599484.1  C2 domain-containing protein 5 isoform X6

    Related
    ENSMAUP00000012152.2, ENSMAUT00000016055.2
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  13. XM_040743549.1 → XP_040599483.1  C2 domain-containing protein 5 isoform X5

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  14. XM_040743545.1 → XP_040599479.1  C2 domain-containing protein 5 isoform X1

    Related
    ENSMAUP00000012175.2, ENSMAUT00000016079.2
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  15. XM_040743565.1 → XP_040599499.1  C2 domain-containing protein 5 isoform X20

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  16. XM_040743558.1 → XP_040599492.1  C2 domain-containing protein 5 isoform X13

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  17. XM_040743563.1 → XP_040599497.1  C2 domain-containing protein 5 isoform X18

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  18. XM_040743560.1 → XP_040599494.1  C2 domain-containing protein 5 isoform X15

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  19. XM_040743554.1 → XP_040599488.1  C2 domain-containing protein 5 isoform X10

    UniProtKB/TrEMBL
    A0A3Q0CWF9
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  20. XM_040743561.1 → XP_040599495.1  C2 domain-containing protein 5 isoform X16

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  21. XM_040743556.1 → XP_040599490.1  C2 domain-containing protein 5 isoform X11

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  22. XM_040743559.1 → XP_040599493.1  C2 domain-containing protein 5 isoform X14

    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  23. XM_040743552.1 → XP_040599486.1  C2 domain-containing protein 5 isoform X8

    Related
    ENSMAUP00000012188.2, ENSMAUT00000016092.2
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone
Nucleotide Protein
Heading Accession and Version

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