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Slc24a1 solute carrier family 24 member 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101828728, updated on 8-Mar-2024

Summary

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Gene symbol
Slc24a1
Gene description
solute carrier family 24 member 1
See related
EnsemblRapid:ENSMAUG00000012813
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429267.1 (4969357..4994250, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801659.1 (6821665..6846588)

NW_024429267.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene DENN domain containing 4A Neighboring gene integrator complex subunit 14 Neighboring gene 3-hydroxyacyl-CoA dehydratase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium, potassium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic depression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/potassium/calcium exchanger 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429267.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    4969357..4994250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040740299.1 → XP_040596233.1  sodium/potassium/calcium exchanger 1 isoform X4

    UniProtKB/TrEMBL
    A0A1U7QVK6
    Conserved Domains (1) summary
    TIGR00927
    Location:1 → 1067
    2A1904; K+-dependent Na+/Ca+ exchanger

  2. XM_040740300.1 → XP_040596234.1  sodium/potassium/calcium exchanger 1 isoform X5

    UniProtKB/TrEMBL
    A0A1U8C054
    Conserved Domains (1) summary
    TIGR00927
    Location:1 → 1055
    2A1904; K+-dependent Na+/Ca+ exchanger

  3. XM_040740298.1 → XP_040596232.1  sodium/potassium/calcium exchanger 1 isoform X3

    UniProtKB/TrEMBL
    A0A1U7QK39
    Conserved Domains (1) summary
    TIGR00927
    Location:1 → 1085
    2A1904; K+-dependent Na+/Ca+ exchanger

  4. XM_040740297.1 → XP_040596231.1  sodium/potassium/calcium exchanger 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0CYZ1
    Related
    ENSMAUP00000012536.2, ENSMAUT00000016443.2
    Conserved Domains (1) summary
    TIGR00927
    Location:1 → 1137
    2A1904; K+-dependent Na+/Ca+ exchanger

  5. XM_040740296.1 → XP_040596230.1  sodium/potassium/calcium exchanger 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CYZ1
    Conserved Domains (1) summary
    TIGR00927
    Location:1 → 1187
    2A1904; K+-dependent Na+/Ca+ exchanger
Nucleotide Protein
Heading Accession and Version

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