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LOC101825183 general transcription factor IIH subunit 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101825183, updated on 16-Nov-2023

Summary

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Gene symbol
LOC101825183
Gene description
general transcription factor IIH subunit 2
See related
EnsemblRapid:ENSMAUG00000035539
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Also known as
Gtf2h2
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429201.1 (18592786..18622020)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801607.1 (13065359..13087567)

NW_024429201.1Genomic Context describing neighboring genes Neighboring gene MARVEL domain containing 2 Neighboring gene uncharacterized LOC110339286 Neighboring gene occludin Neighboring gene baculoviral IAP repeat-containing protein 1a Neighboring gene baculoviral IAP repeat-containing protein 1a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 2
Names
general transcription factor IIH, polypeptide 2, 44kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429201.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    18592786..18622020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040728849.1 → XP_040584783.1  general transcription factor IIH subunit 2

    UniProtKB/TrEMBL
    A0A1U7QGE7
    Related
    ENSMAUP00000039489.1, ENSMAUT00000079543.1
    Conserved Domains (2) summary
    COG5151
    Location:11 → 385
    SSL1; RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]
    cd01453
    Location:56 → 236
    vWA_transcription_factor_IIH_type; Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins ...
Nucleotide Protein
Heading Accession and Version

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