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CACNA2D1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101820977, updated on 3-Aug-2024

Summary

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Gene symbol
CACNA2D1
Gene description
calcium voltage-gated channel auxiliary subunit alpha2delta 1
See related
Ensembl:ENSFALG00000010545
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
40
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 1A NC_021672.1 (10029730..10401804)

Chromosome 1A - NC_021672.1Genomic Context describing neighboring genes Neighboring gene semaphorin 3E Neighboring gene piccolo presynaptic cytomatrix protein Neighboring gene hepatocyte growth factor Neighboring gene semaphorin 3C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021672.1 Chromosome 1A Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of L-type voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent calcium channel subunit alpha-2/delta-1
Names
calcium channel, voltage-dependent, alpha 2/delta subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021672.1 Reference FicAlb1.5 Primary Assembly

    Range
    10029730..10401804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016305177.1 → XP_016160663.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1

    UniProtKB/TrEMBL
    A0A803VMZ3

  2. XM_005039206.1 → XP_005039263.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X2

    UniProtKB/TrEMBL
    A0A803VMZ3
    Conserved Domains (4) summary
    cd01463
    Location:240 → 418
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:447 → 534
    Cache_1; Cache domain
    pfam08399
    Location:104 → 224
    VWA_N; VWA N-terminal
    pfam08473
    Location:560 → 644
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd

  3. XM_005039207.1 → XP_005039264.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X3

    UniProtKB/TrEMBL
    A0A803VMZ3, A0A803W702
    Related
    ENSFALP00000030758.1, ENSFALT00000042346.1
    Conserved Domains (4) summary
    cd01463
    Location:240 → 418
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:447 → 529
    Cache_1; Cache domain
    pfam08399
    Location:104 → 224
    VWA_N; VWA N-terminal
    pfam08473
    Location:541 → 625
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
Nucleotide Protein
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