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UCHL5 ubiquitin C-terminal hydrolase L5 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101807637, updated on 3-Aug-2024

Summary

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Gene symbol
UCHL5
Gene description
ubiquitin C-terminal hydrolase L5
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 8 NC_021680.1 (26515842..26534160)

Chromosome 8 - NC_021680.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 73 Neighboring gene beta-1,3-galactosyltransferase 2 Neighboring gene glutaredoxin 2 Neighboring gene Ro60, Y RNA binding protein Neighboring gene DMRT like family B with proline rich C-terminal 1 Neighboring gene GLIS family zinc finger 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021680.1 Chromosome 8 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase isozyme L5
Names
ubiquitin carboxyl-terminal hydrolase L5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021680.1 Reference FicAlb1.5 Primary Assembly

    Range
    26515842..26534160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005050554.1 → XP_005050611.1  ubiquitin carboxyl-terminal hydrolase isozyme L5

    Conserved Domains (3) summary
    cd02255
    Location:92 → 289
    Peptidase_C12; Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and BAP1
    pfam15272
    Location:270 → 324
    BBP1_C; Spindle pole body component BBP1, C-terminal
    pfam15327
    Location:4 → 83
    Tankyrase_bdg_C; Tankyrase binding protein C terminal domain
Nucleotide Protein
Heading Accession and Version

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