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PTAR1 protein prenyltransferase alpha subunit repeat containing 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 101798069, updated on 8-Mar-2024

Summary

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Gene symbol
PTAR1
Gene description
protein prenyltransferase alpha subunit repeat containing 1
Locus tag
Anapl_14435
See related
EnsemblRapid:ENSAPLG00030006653
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
9
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) Z NC_051804.1 (38167525..38202869, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) Z NC_040075.1 (36997035..37018733)

Chromosome Z - NC_051804.1Genomic Context describing neighboring genes Neighboring gene endosomal transmembrane epsin interactor 1 Neighboring gene amyloid beta precursor protein binding family A member 1 Neighboring gene uncharacterized LOC110352296 Neighboring gene MAM domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein prenyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein prenylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein prenyltransferase alpha subunit repeat-containing protein 1
Names
Protein prenyltransferase alpha subunit repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051804.1 Reference ZJU1.0 Primary Assembly

    Range
    38167525..38202869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038170551.1 → XP_038026479.1  protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    R0K014
    Related
    ENSAPLP00030013188.1, ENSAPLT00030017512.1
    Conserved Domains (2) summary
    PLN02789
    Location:78 → 235
    PLN02789; farnesyltranstransferase
    pfam01239
    Location:285 → 313
    PPTA; Protein prenyltransferase alpha subunit repeat

  2. XM_038170552.1 → XP_038026480.1  protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    R0K014
    Conserved Domains (2) summary
    PLN02789
    Location:78 → 235
    PLN02789; farnesyltranstransferase
    pfam01239
    Location:285 → 313
    PPTA; Protein prenyltransferase alpha subunit repeat

  3. XM_038170550.1 → XP_038026478.1  protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B9SWM9, R0K014
    Related
    ENSAPLP00030013246.1, ENSAPLT00030017610.1
    Conserved Domains (2) summary
    PLN02789
    Location:89 → 246
    PLN02789; farnesyltranstransferase
    pfam01239
    Location:296 → 324
    PPTA; Protein prenyltransferase alpha subunit repeat
Nucleotide Protein
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