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APBB2 amyloid beta precursor protein binding family B member 2 [ Anas platyrhynchos (mallard) ]

Gene ID: 101797892, updated on 8-Mar-2024

Summary

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Gene symbol
APBB2
Gene description
amyloid beta precursor protein binding family B member 2
See related
EnsemblRapid:ENSAPLG00030001783
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
25
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 4 NC_051775.1 (51951006..52111871)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 4 NC_040049.1 (52069461..52234911)

Chromosome 4 - NC_051775.1Genomic Context describing neighboring genes Neighboring gene LIM and calponin homology domains 1 Neighboring gene ubiquitin C-terminal hydrolase L1 Neighboring gene maestro heat-like repeat-containing protein family member 2B Neighboring gene NOP2/Sun RNA methyltransferase family member 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid-beta A4 precursor protein-binding family B member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051775.1 Reference ZJU1.0 Primary Assembly

    Range
    51951006..52111871
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027457199.2 → XP_027313000.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X6

    UniProtKB/TrEMBL
    A0A8B9TK04
    Related
    ENSAPLP00030004249.1, ENSAPLT00030005118.1

  2. XM_027457201.2 → XP_027313002.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X7

    UniProtKB/TrEMBL
    A0A8B9TK04

  3. XM_027457204.2 → XP_027313005.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X10

    UniProtKB/TrEMBL
    A0A8B9TLW5

  4. XM_027457202.2 → XP_027313003.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X8

    UniProtKB/TrEMBL
    A0A8B9TK04, A0A8B9TLG5

  5. XM_027457205.2 → XP_027313006.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X11

    UniProtKB/TrEMBL
    A0A8B9TLW5
    Related
    ENSAPLP00030004205.1, ENSAPLT00030005074.1

  6. XM_038177982.1 → XP_038033910.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X12

    UniProtKB/TrEMBL
    A0A8B9TLW5
    Conserved Domains (3) summary
    smart00456
    Location:286 → 317
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:555 → 681
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:390 → 527
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  7. XM_027457196.2 → XP_027312997.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X5

    UniProtKB/TrEMBL
    A0A8B9TK04

  8. XM_027457193.2 → XP_027312994.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X5

    UniProtKB/TrEMBL
    A0A8B9TK04
    Related
    ENSAPLP00030004177.1, ENSAPLT00030005046.1

  9. XM_021269423.3 → XP_021125098.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X6

    UniProtKB/TrEMBL
    A0A8B9TK04
    Conserved Domains (3) summary
    smart00456
    Location:287 → 318
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:580 → 706
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:412 → 551
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  10. XM_038177979.1 → XP_038033907.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8B9TK04
    Conserved Domains (3) summary
    cd01271
    Location:595 → 721
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:428 → 567
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:304 → 332
    WW; WW domain

  11. XM_038177977.1 → XP_038033905.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8B9TK04
    Conserved Domains (3) summary
    cd01271
    Location:563 → 689
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:395 → 534
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:271 → 299
    WW; WW domain

  12. XM_038177980.1 → XP_038033908.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X4

    UniProtKB/TrEMBL
    A0A8B9TK04
    Related
    ENSAPLP00030004236.1, ENSAPLT00030005105.1
    Conserved Domains (3) summary
    cd01271
    Location:561 → 687
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:395 → 532
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:271 → 299
    WW; WW domain

  13. XM_038177981.1 → XP_038033909.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X9

    UniProtKB/TrEMBL
    A0A8B9TLW5
    Related
    ENSAPLP00030004229.1, ENSAPLT00030005098.1
    Conserved Domains (3) summary
    cd01271
    Location:542 → 668
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:374 → 513
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:271 → 299
    WW; WW domain

  14. XM_038177978.1 → XP_038033906.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8B9TK04
    Conserved Domains (3) summary
    cd01271
    Location:562 → 688
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:394 → 533
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:270 → 298
    WW; WW domain

  15. XM_013095647.4 → XP_012951101.2  amyloid-beta A4 precursor protein-binding family B member 2 isoform X15

    Conserved Domains (2) summary
    cd01271
    Location:156 → 282
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:1 → 127
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  16. XM_021269429.3 → XP_021125104.2  amyloid-beta A4 precursor protein-binding family B member 2 isoform X14

  17. XM_021269428.3 → XP_021125103.2  amyloid-beta A4 precursor protein-binding family B member 2 isoform X13

  18. XM_021269430.3 → XP_021125105.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X16

    Conserved Domains (1) summary
    cd01271
    Location:34 → 160
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain

  19. XM_038177983.1 → XP_038033911.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X16

    Conserved Domains (1) summary
    cd01271
    Location:34 → 160
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
Nucleotide Protein
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