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SLC6A1 solute carrier family 6 member 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 101795056, updated on 8-Mar-2024

Summary

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Gene symbol
SLC6A1
Gene description
solute carrier family 6 member 1
Locus tag
Anapl_13667
See related
EnsemblRapid:ENSAPLG00030011493
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 13 NC_051784.1 (17583917..17644013)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 13 NC_040058.1 (14572647..14629536, complement)

Chromosome 13 - NC_051784.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 11 Neighboring gene uncharacterized LOC119718195 Neighboring gene uncharacterized LOC106018974 Neighboring gene uncharacterized LOC110351681 Neighboring gene histamine receptor H1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-aminobutyric acid:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent GABA transporter 1
Names
Sodium- and chloride-dependent GABA transporter 1
solute carrier family 6 (neurotransmitter transporter, GABA), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051784.1 Reference ZJU1.0 Primary Assembly

    Range
    17583917..17644013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027467648.2 → XP_027323449.1  sodium- and chloride-dependent GABA transporter 1

    UniProtKB/TrEMBL
    R0LYQ3, U3ITL2
    Related
    ENSAPLP00030020610.1, ENSAPLT00030029750.1
    Conserved Domains (1) summary
    cd11506
    Location:2 → 598
    SLC6sbd_GAT1; Na(+)- and Cl(-)-dependent GABA transporter 1; solute-binding domain

  2. XM_027467649.2 → XP_027323450.1  sodium- and chloride-dependent GABA transporter 1

    UniProtKB/TrEMBL
    R0LYQ3, U3ITL2
    Conserved Domains (1) summary
    cd11506
    Location:2 → 598
    SLC6sbd_GAT1; Na(+)- and Cl(-)-dependent GABA transporter 1; solute-binding domain
Nucleotide Protein
Heading Accession and Version

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