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LOC101794235 protein-arginine deiminase type-2 [ Anas platyrhynchos (mallard) ]

Gene ID: 101794235, updated on 7-Dec-2023

Summary

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Gene symbol
LOC101794235
Gene description
protein-arginine deiminase type-2
Locus tag
Anapl_03446
See related
EnsemblRapid:ENSAPLG00030020830
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Also known as
PADI2
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Genomic context

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Location:
chromosome: 22
Exon count:
16
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 22 NC_051793.1 (7191561..7202625)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 22 NC_040067.1 (1069415..1080495, complement)

Chromosome 22 - NC_051793.1Genomic Context describing neighboring genes Neighboring gene regulator of chromosome condensation 2 Neighboring gene protein-arginine deiminase type-3 Neighboring gene protein-arginine deiminase type-1 Neighboring gene succinate dehydrogenase complex iron sulfur subunit B Neighboring gene ATPase cation transporting 13A2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-arginine deiminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-arginine deiminase type-2
Names
peptidyl arginine deiminase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051793.1 Reference ZJU1.0 Primary Assembly

    Range
    7191561..7202625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005012609.5 → XP_005012666.3  protein-arginine deiminase type-2

    UniProtKB/TrEMBL
    U3J6I6
    Related
    ENSAPLP00030034887.1, ENSAPLT00030054395.1
    Conserved Domains (3) summary
    pfam03068
    Location:286 → 661
    PAD; Protein-arginine deiminase (PAD)
    pfam08526
    Location:1 → 113
    PAD_N; Protein-arginine deiminase (PAD) N-terminal domain
    pfam08527
    Location:115 → 273
    PAD_M; Protein-arginine deiminase (PAD) middle domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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