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ALX1 ALX homeobox 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 101790472, updated on 8-Mar-2024

Summary

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Gene symbol
ALX1
Gene description
ALX homeobox 1
Locus tag
Anapl_15754
See related
EnsemblRapid:ENSAPLG00030009550
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 1 NC_051772.1 (50780353..50803693, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 1 NC_040046.1 (152487430..152508501)

Chromosome 1 - NC_051772.1Genomic Context describing neighboring genes Neighboring gene neurotensin Neighboring gene Ras association domain family member 9 Neighboring gene leucine rich repeats and IQ motif containing 1 Neighboring gene tetraspanin 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ALX homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051772.1 Reference ZJU1.0 Primary Assembly

    Range
    50780353..50803693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005018392.5 → XP_005018449.2  ALX homeobox protein 1

    UniProtKB/TrEMBL
    A0A8B9QQV8, U3I088
    Related
    ENSAPLP00030017774.1, ENSAPLT00030024751.1
    Conserved Domains (2) summary
    pfam00046
    Location:137 → 190
    Homeobox; Homeobox domain
    pfam03826
    Location:304 → 321
    OAR; OAR domain
Nucleotide Protein
Heading Accession and Version

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