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RASGEF1B RasGEF domain family member 1B [ Anas platyrhynchos (mallard) ]

Gene ID: 101789707, updated on 8-Mar-2024

Summary

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Gene symbol
RASGEF1B
Gene description
RasGEF domain family member 1B
Locus tag
Anapl_00849
See related
EnsemblRapid:ENSAPLG00030004110
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See RASGEF1B in Genome Data Viewer
Location:
chromosome: 4
Exon count:
21
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 4 NC_051775.1 (45373338..45506600, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 4 NC_040049.1 (45464577..45614141, complement)

Chromosome 4 - NC_051775.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily G member 2 (JR blood group) Neighboring gene protein kinase cGMP-dependent 2 Neighboring gene uncharacterized LOC119716915 Neighboring gene uncharacterized LOC110351530 Neighboring gene uncharacterized LOC110351535

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-GEF domain-containing family member 1B
Names
Ras-GEF domain-containing family member 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051775.1 Reference ZJU1.0 Primary Assembly

    Range
    45373338..45506600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005012766.5 → XP_005012823.4  ras-GEF domain-containing family member 1B isoform X1

    UniProtKB/TrEMBL
    A0A493TTC4, R0K948
    Conserved Domains (2) summary
    cd06224
    Location:42 → 165
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam00617
    Location:208 → 402
    RasGEF; RasGEF domain

  2. XM_021267702.3 → XP_021123377.3  ras-GEF domain-containing family member 1B isoform X2

    UniProtKB/TrEMBL
    U3J656
    Conserved Domains (2) summary
    cd06224
    Location:62 → 185
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam00617
    Location:228 → 422
    RasGEF; RasGEF domain

  3. XM_027456979.2 → XP_027312780.2  ras-GEF domain-containing family member 1B isoform X1

    UniProtKB/TrEMBL
    A0A493TTC4, R0K948
    Related
    ENSAPLP00030008824.1, ENSAPLT00030011161.1
    Conserved Domains (2) summary
    cd06224
    Location:42 → 165
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam00617
    Location:208 → 402
    RasGEF; RasGEF domain

  4. XM_005012765.5 → XP_005012822.4  ras-GEF domain-containing family member 1B isoform X1

    UniProtKB/TrEMBL
    A0A493TTC4, R0K948
    Conserved Domains (2) summary
    cd06224
    Location:42 → 165
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam00617
    Location:208 → 402
    RasGEF; RasGEF domain

  5. XM_005012763.5 → XP_005012820.4  ras-GEF domain-containing family member 1B isoform X1

    UniProtKB/TrEMBL
    A0A493TTC4, R0K948
    Conserved Domains (2) summary
    cd06224
    Location:42 → 165
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam00617
    Location:208 → 402
    RasGEF; RasGEF domain

  6. XM_005012762.5 → XP_005012819.4  ras-GEF domain-containing family member 1B isoform X1

    UniProtKB/TrEMBL
    A0A493TTC4, R0K948
    Conserved Domains (2) summary
    cd06224
    Location:42 → 165
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam00617
    Location:208 → 402
    RasGEF; RasGEF domain

  7. XM_005012767.5 → XP_005012824.3  ras-GEF domain-containing family member 1B isoform X1

    UniProtKB/TrEMBL
    A0A493TTC4, R0K948
    Conserved Domains (2) summary
    cd06224
    Location:42 → 165
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam00617
    Location:208 → 402
    RasGEF; RasGEF domain
Nucleotide Protein
Heading Accession and Version

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