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Taf11 TATA-box binding protein associated factor 11 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101726744, updated on 8-Mar-2024

Summary

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Gene symbol
Taf11
Gene description
TATA-box binding protein associated factor 11
Locus tag
GW7_15645
See related
Ensembl:ENSHGLG00000016220
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Taf11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624754.1 (22463406..22471197)

NW_004624754.1Genomic Context describing neighboring genes Neighboring gene t-complex 11 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 1A Neighboring gene uncharacterized LOC110349623 Neighboring gene bridge-like lipid transfer protein family member 3A Neighboring gene uncharacterized LOC110349624 Neighboring gene small nuclear ribonucleoprotein polypeptide C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624754 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA polymerase II preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 11
Names
Transcription initiation factor TFIID subunit 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624754.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    22463406..22471197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004846732.3 → XP_004846789.1  transcription initiation factor TFIID subunit 11 isoform X2

    Conserved Domains (1) summary
    cl02176
    Location:107 → 136
    TAF11; TATA Binding Protein (TBP) Associated Factor 11 (TAF11) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex

  2. XM_004846731.3 → XP_004846788.1  transcription initiation factor TFIID subunit 11 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JGN1, G5BCF5
    Related
    ENSHGLP00000022745.1, ENSHGLT00000022959.1
    Conserved Domains (1) summary
    pfam04719
    Location:107 → 191
    TAFII28; hTAFII28-like protein conserved region
Nucleotide Protein
Heading Accession and Version

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