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LOC101720606 general transcription factor II-I repeat domain-containing protein 2B [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101720606, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101720606
Gene description
general transcription factor II-I repeat domain-containing protein 2B
Locus tag
GW7_12170
See related
Ensembl:ENSHGLG00000016284
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Gtf2ird2b
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624740.1 (13388554..13426350)

NW_004624740.1Genomic Context describing neighboring genes Neighboring gene cytosolic arginine sensor for mTORC1 subunit 2 Neighboring gene RCC1 like Neighboring gene uncharacterized LOC106008999 Neighboring gene neutrophil cytosolic factor 1 Neighboring gene general transcription factor IIi

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624740 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor II-I repeat domain-containing protein 2B
Names
GTF2I repeat domain containing 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624740.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    13388554..13426350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004840011.3 → XP_004840068.1  general transcription factor II-I repeat domain-containing protein 2B isoform X3

    UniProtKB/TrEMBL
    G5C6B2
    Conserved Domains (1) summary
    pfam02946
    Location:107 → 179
    GTF2I; GTF2I-like repeat

  2. XM_021254350.1 → XP_021110009.1  general transcription factor II-I repeat domain-containing protein 2B isoform X5

    Conserved Domains (1) summary
    pfam02946
    Location:110 → 182
    GTF2I; GTF2I-like repeat

  3. XM_021254352.1 → XP_021110011.1  general transcription factor II-I repeat domain-containing protein 2B isoform X6

    Conserved Domains (1) summary
    pfam02946
    Location:110 → 182
    GTF2I; GTF2I-like repeat

  4. XM_021254346.1 → XP_021110005.1  general transcription factor II-I repeat domain-containing protein 2B isoform X1

    UniProtKB/TrEMBL
    G5C6B2
    Conserved Domains (1) summary
    pfam02946
    Location:110 → 182
    GTF2I; GTF2I-like repeat

  5. XM_021254347.1 → XP_021110006.1  general transcription factor II-I repeat domain-containing protein 2B isoform X2

    UniProtKB/TrEMBL
    G5C6B2
    Conserved Domains (1) summary
    pfam02946
    Location:110 → 182
    GTF2I; GTF2I-like repeat

  6. XM_021254348.1 → XP_021110007.1  general transcription factor II-I repeat domain-containing protein 2B isoform X3

    UniProtKB/TrEMBL
    G5C6B2
    Related
    ENSHGLP00000022830.1, ENSHGLT00000023044.1
    Conserved Domains (1) summary
    pfam02946
    Location:107 → 179
    GTF2I; GTF2I-like repeat

  7. XM_021254349.1 → XP_021110008.1  general transcription factor II-I repeat domain-containing protein 2B isoform X4

    Conserved Domains (1) summary
    pfam02946
    Location:157 → 229
    GTF2I; GTF2I-like repeat
Nucleotide Protein
Heading Accession and Version

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