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Tbc1d30 TBC1 domain family member 30 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101710032, updated on 8-Mar-2024

Summary

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Gene symbol
Tbc1d30
Gene description
TBC1 domain family member 30
See related
Ensembl:ENSHGLG00000013049
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624802.1 (3533703..3623349, complement)

NW_004624802.1Genomic Context describing neighboring genes Neighboring gene glycylpeptide N-tetradecanoyltransferase 1 pseudogene Neighboring gene RWD domain-containing protein 1 pseudogene Neighboring gene OTU domain-containing protein 5 pseudogene Neighboring gene L-lactate dehydrogenase A chain pseudogene Neighboring gene glucosamine (N-acetyl)-6-sulfatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624802 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TBC1 domain family member 30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624802.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    3533703..3623349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021241457.1 → XP_021097116.1  TBC1 domain family member 30 isoform X4

    Conserved Domains (2) summary
    smart00164
    Location:95 → 316
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    pfam15733
    Location:485 → 633
    DUF4682; Domain of unknown function (DUF4682)

  2. XM_021241458.1 → XP_021097117.1  TBC1 domain family member 30 isoform X5

    Conserved Domains (2) summary
    pfam00566
    Location:19 → 199
    RabGAP-TBC; Rab-GTPase-TBC domain
    pfam15733
    Location:360 → 508
    DUF4682; Domain of unknown function (DUF4682)

  3. XM_013078324.2 → XP_012933778.1  TBC1 domain family member 30 isoform X1

    Conserved Domains (2) summary
    smart00164
    Location:90 → 311
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    pfam15733
    Location:480 → 629
    DUF4682; Domain of unknown function (DUF4682)

  4. XM_004861113.3 → XP_004861170.1  TBC1 domain family member 30 isoform X2

    Related
    ENSHGLP00000018238.1, ENSHGLT00000018419.1
    Conserved Domains (2) summary
    smart00164
    Location:90 → 311
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    pfam15733
    Location:480 → 609
    DUF4682; Domain of unknown function (DUF4682)

  5. XM_021241456.1 → XP_021097115.1  TBC1 domain family member 30 isoform X3

    Conserved Domains (2) summary
    smart00164
    Location:65 → 286
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    pfam15733
    Location:455 → 603
    DUF4682; Domain of unknown function (DUF4682)
Nucleotide Protein
Heading Accession and Version

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