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Trabd2b TraB domain containing 2B [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101701838, updated on 8-Mar-2024

Summary

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Gene symbol
Trabd2b
Gene description
TraB domain containing 2B
See related
Ensembl:ENSHGLG00000010693
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Trabd2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624859.1 (4849319..5121008)

NW_004624859.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 5 member 9 Neighboring gene inositol polyphosphate multikinase pseudogene Neighboring gene NUT family member 2G-like Neighboring gene uncharacterized LOC110346601 Neighboring gene uncharacterized LOC106008106 Neighboring gene uncharacterized LOC110346600 Neighboring gene uncharacterized LOC110346607 Neighboring gene uncharacterized LOC110346614

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624859 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in organelle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metalloprotease TIKI2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624859.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    4849319..5121008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004869301.3 → XP_004869358.1  metalloprotease TIKI2 isoform X6

    Conserved Domains (1) summary
    pfam01963
    Location:41 → 370
    TraB; TraB family

  2. XM_021247940.1 → XP_021103599.1  metalloprotease TIKI2 isoform X5

    Conserved Domains (1) summary
    pfam01963
    Location:41 → 370
    TraB; TraB family

  3. XM_004869299.2 → XP_004869356.1  metalloprotease TIKI2 isoform X2

    Conserved Domains (1) summary
    pfam01963
    Location:41 → 370
    TraB; TraB family

  4. XM_021247938.1 → XP_021103597.1  metalloprotease TIKI2 isoform X1

    Conserved Domains (1) summary
    pfam01963
    Location:41 → 370
    TraB; TraB family

  5. XM_021247939.1 → XP_021103598.1  metalloprotease TIKI2 isoform X3

    Conserved Domains (1) summary
    pfam01963
    Location:41 → 348
    TraB; TraB family

  6. XM_004869300.2 → XP_004869357.1  metalloprotease TIKI2 isoform X4

    Related
    ENSHGLP00000014949.1, ENSHGLT00000015099.1
    Conserved Domains (1) summary
    pfam01963
    Location:41 → 348
    TraB; TraB family

  7. XM_021247941.1 → XP_021103600.1  metalloprotease TIKI2 isoform X7

    Conserved Domains (1) summary
    pfam01963
    Location:27 → 240
    TraB; TraB family
Nucleotide Protein
Heading Accession and Version

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