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Col26a1 collagen type XXVI alpha 1 chain [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101698920, updated on 8-Mar-2024

Summary

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Gene symbol
Col26a1
Gene description
collagen type XXVI alpha 1 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624740.1 (15822883..15971110, complement)

NW_004624740.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110348166 Neighboring gene myosin light chain 10 Neighboring gene serine-threonine kinase receptor-associated protein pseudogene Neighboring gene uncharacterized LOC110348227 Neighboring gene LYR motif-containing protein 1-like Neighboring gene regulator of nonsense transcripts 3A pseudogene Neighboring gene intraflagellar transport 22

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624740 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-1(XXVI) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624740.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    15822883..15971110 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013070526.2 → XP_012925980.1  collagen alpha-1(XXVI) chain isoform X1

    Conserved Domains (1) summary
    pfam07546
    Location:175 → 243
    EMI; EMI domain

  2. XM_004840137.2 → XP_004840194.1  collagen alpha-1(XXVI) chain isoform X2

    Conserved Domains (1) summary
    pfam07546
    Location:175 → 241
    EMI; EMI domain
Nucleotide Protein
Heading Accession and Version

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