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LRMDA leucine rich melanocyte differentiation associated [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101680418, updated on 8-Mar-2024

Summary

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Gene symbol
LRMDA
Gene description
leucine rich melanocyte differentiation associated
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421449.1 (6302221..7351157)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569253.1 (4623904..5673588, complement)

NW_025421449.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123393006 Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene zinc finger protein 503 Neighboring gene 60S ribosomal protein L23a Neighboring gene uncharacterized LOC106007116 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106007108 Neighboring gene uncharacterized LOC106007109

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in melanocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich melanocyte differentiation-associated protein
Names
leucine-rich repeat-containing protein C10orf11 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421449.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    6302221..7351157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045083585.1 → XP_044939520.1  leucine-rich melanocyte differentiation-associated protein isoform X2

    UniProtKB/TrEMBL
    A0A8U0SAQ4
    Conserved Domains (2) summary
    COG4886
    Location:19 → 93
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:34 → 54
    LRR_1; leucine-rich repeat [structural motif]

  2. XM_045083584.1 → XP_044939519.1  leucine-rich melanocyte differentiation-associated protein isoform X1

    UniProtKB/TrEMBL
    A0A8U0V6D5
    Conserved Domains (2) summary
    COG4886
    Location:31 → 80
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:42 → 63
    LRR_1; leucine-rich repeat [structural motif]
Nucleotide Protein
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