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PLAG1 PLAG1 zinc finger [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101663352, updated on 8-Mar-2024

Summary

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Gene symbol
PLAG1
Gene description
PLAG1 zinc finger
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103896.1 (85735162..85789196, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558703.1 (85736915..85789328, complement)

NW_022103896.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase isoenzyme 6-like Neighboring gene MOS proto-oncogene, serine/threonine kinase Neighboring gene U6 spliceosomal RNA Neighboring gene adenylosuccinate synthetase isozyme 1-like Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 7 Neighboring gene protein FAM136A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger protein PLAG1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103896.1 Reference ASM31398v2 Primary Assembly

    Range
    85735162..85789196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004697566.2 → XP_004697623.1  zinc finger protein PLAG1 isoform X2

    Conserved Domains (3) summary
    COG5236
    Location:15 → 154
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:70 → 90
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  2. XM_004697565.2 → XP_004697622.1  zinc finger protein PLAG1 isoform X1

    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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