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KLHL13 kelch like family member 13 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101642270, updated on 8-Mar-2024

Summary

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Gene symbol
KLHL13
Gene description
kelch like family member 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111327.1 (15532874..15737050)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558744.1 (15605235..15730948)

NW_022111327.1Genomic Context describing neighboring genes Neighboring gene AP-3 complex subunit sigma-1 Neighboring gene WD repeat domain 44 Neighboring gene mitochondrial import receptor subunit TOM5 homolog Neighboring gene 60S ribosomal protein L39-like Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial nicotinamide adenine dinucleotide transporter SLC25A51-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cullin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul3-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kelch-like protein 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022111327.1 Reference ASM31398v2 Primary Assembly

    Range
    15532874..15737050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045298582.1 → XP_045154517.1  kelch-like protein 13 isoform X1

  2. XM_004710083.2 → XP_004710140.1  kelch-like protein 13 isoform X5

    Conserved Domains (3) summary
    PHA03098
    Location:76 → 619
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:363 → 411
    Kelch; KELCH repeat [structural motif]
    cd18239
    Location:53 → 180
    BTB_POZ_KLHL9_13; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like proteins KLHL9 and KLHL13

  3. XM_045298583.1 → XP_045154518.1  kelch-like protein 13 isoform X1

  4. XM_004710080.2 → XP_004710137.1  kelch-like protein 13 isoform X2

    Conserved Domains (3) summary
    PHA03098
    Location:95 → 638
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:382 → 430
    Kelch; KELCH repeat [structural motif]
    cd18239
    Location:72 → 199
    BTB_POZ_KLHL9_13; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like proteins KLHL9 and KLHL13

  5. XM_004710081.2 → XP_004710138.1  kelch-like protein 13 isoform X3

    Conserved Domains (3) summary
    PHA03098
    Location:92 → 635
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:379 → 427
    Kelch; KELCH repeat [structural motif]
    cd18239
    Location:69 → 196
    BTB_POZ_KLHL9_13; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like proteins KLHL9 and KLHL13

  6. XM_004710082.2 → XP_004710139.1  kelch-like protein 13 isoform X4

    Conserved Domains (3) summary
    PHA03098
    Location:86 → 629
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:373 → 421
    Kelch; KELCH repeat [structural motif]
    cd18239
    Location:63 → 190
    BTB_POZ_KLHL9_13; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like proteins KLHL9 and KLHL13

  7. XM_045298584.1 → XP_045154519.1  kelch-like protein 13 isoform X3

    Conserved Domains (3) summary
    PHA03098
    Location:92 → 635
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:379 → 427
    Kelch; KELCH repeat [structural motif]
    cd18239
    Location:69 → 196
    BTB_POZ_KLHL9_13; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like proteins KLHL9 and KLHL13
Nucleotide Protein
Heading Accession and Version

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