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FLCN folliculin [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101641559, updated on 20-Sep-2024

Summary

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Gene symbol
FLCN
Gene description
folliculin
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022105908.1 (16711499..16734751)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558770.1 (4454737..4467469, complement)

NW_022105908.1Genomic Context describing neighboring genes Neighboring gene COP9 signalosome subunit 3 Neighboring gene 60S ribosomal protein L7a-like Neighboring gene phospholipase D family member 6 Neighboring gene activating transcription factor 7-interacting protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
folliculin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022105908.1 Reference ASM31398v2 Primary Assembly

    Range
    16711499..16734751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045293347.1 → XP_045149282.1  folliculin isoform X1

    Conserved Domains (2) summary
    pfam11704
    Location:106 → 265
    Folliculin; Vesicle coat protein involved in Golgi to plasma membrane transport
    pfam16692
    Location:343 → 564
    Folliculin_C; Folliculin C-terminal domain

  2. XM_045293349.1 → XP_045149284.1  folliculin isoform X2

  3. XM_045293346.1 → XP_045149281.1  folliculin isoform X1

    Conserved Domains (2) summary
    pfam11704
    Location:106 → 265
    Folliculin; Vesicle coat protein involved in Golgi to plasma membrane transport
    pfam16692
    Location:343 → 564
    Folliculin_C; Folliculin C-terminal domain

  4. XM_045293348.1 → XP_045149283.1  folliculin isoform X1

    Conserved Domains (2) summary
    pfam11704
    Location:106 → 265
    Folliculin; Vesicle coat protein involved in Golgi to plasma membrane transport
    pfam16692
    Location:343 → 564
    Folliculin_C; Folliculin C-terminal domain

  5. XM_004712948.2 → XP_004713005.1  folliculin isoform X1

    Conserved Domains (2) summary
    pfam11704
    Location:106 → 265
    Folliculin; Vesicle coat protein involved in Golgi to plasma membrane transport
    pfam16692
    Location:343 → 564
    Folliculin_C; Folliculin C-terminal domain
Nucleotide Protein
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