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PSAP prosaposin [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101639622, updated on 8-Mar-2024

Summary

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Gene symbol
PSAP
Gene description
prosaposin
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103968.1 (63919100..63952415, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558709.1 (63629563..63662698, complement)

NW_022103968.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C10orf105 homolog Neighboring gene cadherin related 23 Neighboring gene U1 spliceosomal RNA Neighboring gene carbohydrate sulfotransferase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in sphingolipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prosaposin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103968.1 Reference ASM31398v2 Primary Assembly

    Range
    63919100..63952415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013004240.2 → XP_012859694.1  prosaposin

    Conserved Domains (3) summary
    smart00162
    Location:21 → 54
    SAPA; Saposin/surfactant protein-B A-type DOMAIN
    smart00741
    Location:410 → 484
    SapB; Saposin (B) Domains
    pfam02199
    Location:495 → 525
    SapA; Saposin A-type domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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