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JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase [ Condylura cristata (star-nosed mole) ]

Gene ID: 101637333, updated on 8-Mar-2024

Summary

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Gene symbol
JMJD6
Gene description
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Condylura cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567139.1 (9016859..9022190, complement)

NW_004567139.1Genomic Context describing neighboring genes Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 Neighboring gene matrix remodeling associated 7 Neighboring gene methyltransferase 23, arginine Neighboring gene serine and arginine rich splicing factor 2 Neighboring gene major facilitator superfamily domain containing 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004567139.1 Unplaced Scaffold Reference ConCri1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables P-TEFb complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H4R3 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
Names
arginine demethylase and lysine hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ConCri1.0

Genomic

  1. NW_004567139.1 Reference ConCri1.0

    Range
    9016859..9022190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012733003.1 → XP_012588457.1  bifunctional arginine demethylase and lysyl-hydroxylase JMJD6

    Conserved Domains (1) summary
    pfam02373
    Location:149 → 263
    JmjC; JmjC domain, hydroxylase
Nucleotide Protein
Heading Accession and Version

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