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Nup43 nucleoporin 43 [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101604805, updated on 8-Mar-2024

Summary

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Gene symbol
Nup43
Gene description
nucleoporin 43
See related
EnsemblRapid:ENSJJAG00000012578
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 9 NC_059110.1 (16339400..16352995)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504316.1 (16359372..16372711)

Chromosome 9 - NC_059110.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 11 Neighboring gene protein-L-isoaspartate (D-aspartate) O-methyltransferase Neighboring gene U6 spliceosomal RNA Neighboring gene large tumor suppressor kinase 1 Neighboring gene katanin catalytic subunit A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleoporin Nup43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059110.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    16339400..16352995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004651129.2 → XP_004651186.1  nucleoporin Nup43

    UniProtKB/TrEMBL
    A0A8C5KFQ7
    Related
    ENSJJAP00000008410.1, ENSJJAT00000014837.2
    Conserved Domains (3) summary
    COG2319
    Location:73 → 374
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:78 → 133
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:73 → 294
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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