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Fbxl6 F-box and leucine rich repeat protein 6 [ Octodon degus (degu) ]

Gene ID: 101574684, updated on 8-Mar-2024

Summary

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Gene symbol
Fbxl6
Gene description
F-box and leucine rich repeat protein 6
See related
Ensembl:ENSODEG00000012874
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524680.1 (3178506..3181468)

NW_004524680.1Genomic Context describing neighboring genes Neighboring gene nascent polypeptide-associated complex subunit alpha pseudogene Neighboring gene solute carrier family 52 member 2 Neighboring gene transmembrane protein 249 Neighboring gene scratch family transcriptional repressor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524680 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/LRR-repeat protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524680.1 Reference OctDeg1.0 Primary Assembly

    Range
    3178506..3181468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004638874.2 → XP_004638931.1  F-box/LRR-repeat protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A6P3F4W0
    Related
    ENSODEP00000017463.1, ENSODET00000017686.1
    Conserved Domains (3) summary
    cd09293
    Location:176 → 395
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:193 → 218
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:110 → 160
    F-box-like; F-box-like

  2. XM_023723834.1 → XP_023579602.1  F-box/LRR-repeat protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A6P6F4T9
    Conserved Domains (3) summary
    sd00034
    Location:193 → 218
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:110 → 157
    F-box-like
    cl28166
    Location:176 → 368
    AMN1; Antagonist of mitotic exit network protein 1
Nucleotide Protein
Heading Accession and Version

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