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Trappc6a trafficking protein particle complex subunit 6A [ Octodon degus (degu) ]

Gene ID: 101561088, updated on 8-Mar-2024

Summary

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Gene symbol
Trappc6a
Gene description
trafficking protein particle complex subunit 6A
See related
Ensembl:ENSODEG00000008693
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524773.1 (2098322..2103421)

NW_004524773.1Genomic Context describing neighboring genes Neighboring gene very-long-chain 3-oxoacyl-CoA reductase-B-like Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 3 Neighboring gene NTPase KAP family P-loop domain containing 1 Neighboring gene protein phosphatase 1 regulatory subunit 37

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524773 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cis-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 6A
Names
trafficking protein particle complex 6A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524773.1 Reference OctDeg1.0 Primary Assembly

    Range
    2098322..2103421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004644408.2 → XP_004644465.1  trafficking protein particle complex subunit 6A isoform X2

    UniProtKB/TrEMBL
    A0A6P3FQ11
    Related
    ENSODEP00000011711.1, ENSODET00000011873.1
    Conserved Domains (1) summary
    cd14944
    Location:3 → 157
    TRAPPC6A_Trs33; Trs33 subunit of the TRAPP complex

  2. XM_023704607.1 → XP_023560375.1  trafficking protein particle complex subunit 6A isoform X1

    UniProtKB/TrEMBL
    A0A6P6DK27
    Conserved Domains (1) summary
    cd14944
    Location:3 → 150
    TRAPPC6A_Trs33; Trs33 subunit of the TRAPP complex
Nucleotide Protein
Heading Accession and Version

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