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Mutyh mutY DNA glycosylase [ Octodon degus (degu) ]

Gene ID: 101560370, updated on 8-Mar-2024

Summary

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Gene symbol
Mutyh
Gene description
mutY DNA glycosylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524683.1 (8692004..8705753)

NW_004524683.1Genomic Context describing neighboring genes Neighboring gene testis associated actin remodelling kinase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L18a pseudogene Neighboring gene target of EGR1, exonuclease Neighboring gene 4-hydroxyphenylpyruvate dioxygenase like Neighboring gene 60S ribosomal protein L36 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524683 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables adenine/guanine mispair binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidized purine DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables purine-specific mismatch base pair DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenine DNA glycosylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524683.1 Reference OctDeg1.0 Primary Assembly

    Range
    8692004..8705753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023724160.1 → XP_023579928.1  adenine DNA glycosylase isoform X2

    UniProtKB/TrEMBL
    A0A6P6F6P4
    Conserved Domains (1) summary
    COG1194
    Location:1 → 360
    MutY; Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs [Replication, recombination and repair]

  2. XM_023724158.1 → XP_023579926.1  adenine DNA glycosylase isoform X1

    UniProtKB/TrEMBL
    A0A6P6F6A7
    Conserved Domains (1) summary
    COG1194
    Location:2 → 366
    MutY; Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs [Replication, recombination and repair]

RNA

  1. XR_002822766.1 RNA Sequence

  2. XR_002822765.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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